Adaptive evolution of the enigmatic Takakia now facing climate change in Tibet

Ruoyang Hu; Xuedong Li; Yong Hu; Runjie Zhang; Qiang Lv; Min Zhang; Xianyong Sheng; Feng Zhao; Zhijia Chen; Yuhan Ding; Huan Yuan; Xiaofeng Wu; Shuang Xing; Xiaoyu Yan; Fang Bao; Ping Wan; Lihong Xiao; Xiaoqin Wang; Wei Xiao; Eva L. Decker; Nico van Gessel; Hugues Renault; Gertrud Wiedemann; Nelly A. Horst; Fabian B. Haas; Per K.I. Wilhelmsson; Kristian K. Ullrich; Eva Neumann; Bin Lv; Chengzhi Liang; Huilong Du; Hongwei Lu; Qiang Gao; Zhukuan Cheng; Hanli You; Peiyong Xin; Jinfang Chu; Chien Hsun Huang; Yang Liu; Shanshan Dong; Liangsheng Zhang; Fei Chen; Lei Deng; Fuzhou Duan; Wenji Zhao; Kai Li; Zhongfeng Li; Xingru Li; Hengjian Cui; Yong E. Zhang; Chuan Ma; Ruiliang Zhu; Yu Jia; Meizhi Wang; Mitsuyasu Hasebe; Jinzhong Fu; Bernard Goffinet; Hong Ma; Stefan A. Rensing; Ralf Reski; Yikun He

doi:10.1016/j.cell.2023.07.003

Adaptive evolution of the enigmatic Takakia now facing climate change in Tibet

Ruoyang Hu
, Xuedong Li
, Yong Hu
, Runjie Zhang
, Qiang Lv
, Min Zhang
, Xianyong Sheng
, Feng Zhao
, Zhijia Chen
, Yuhan Ding
, Huan Yuan
, Xiaofeng Wu
, Shuang Xing
, Xiaoyu Yan
, Fang Bao
, Ping Wan
, Lihong Xiao
, Xiaoqin Wang
, Wei Xiao
, Eva L. Decker

Nico van Gessel, Hugues Renault, Gertrud Wiedemann, Nelly A. Horst, Fabian B. Haas, Per K.I. Wilhelmsson, Kristian K. Ullrich, Eva Neumann, Bin Lv, Chengzhi Liang, Huilong Du, Hongwei Lu, Qiang Gao, Zhukuan Cheng, Hanli You, Peiyong Xin, Jinfang Chu, Chien Hsun Huang, Yang Liu, Shanshan Dong, Liangsheng Zhang, Fei Chen, Lei Deng, Fuzhou Duan, Wenji Zhao, Kai Li, Zhongfeng Li, Xingru Li, Hengjian Cui, Yong E. Zhang, Chuan Ma, Ruiliang Zhu, Yu Jia, Meizhi Wang, Mitsuyasu Hasebe, Jinzhong Fu, Bernard Goffinet, Hong Ma, Stefan A. Rensing, Ralf Reski^*, Yikun He^*

^*此作品的通讯作者

生命科学学院

Capital Normal University
Chinese Academy of Agricultural Sciences
Zhejiang Agriculture and Forestry University
University of Freiburg
Institut de Biologie Moléculaire des Plantes
University of Bern
MetaSystems Hard & Software GmbH
University of Marburg
Max Planck Institute for Evolutionary Biology
University of Guelph
CAS - Chengdu Institute of Biology
CAS - Institute of Genetics and Developmental Biology
University of Chinese Academy of Sciences
Hebei University
Southern University of Science and Technology
Zhejiang University
Yangzhou University
Fudan University
Inner Mongolia University
University of Connecticut
Chinese Academy of Sciences
BGI-Shenzhen
Hainan University
College of Resource Environment and Tourism
CNU
School of Mathematical Sciences
CAS - Institute of Zoology
CAS - Institute of Botany
National Institute for Basic Biology
The Graduate University for Advanced Studies
Pennsylvania State University

科研成果: 期刊稿件 › 文章 › 同行评审

40 引用（Scopus）

摘要

The most extreme environments are the most vulnerable to transformation under a rapidly changing climate. These ecosystems harbor some of the most specialized species, which will likely suffer the highest extinction rates. We document the steepest temperature increase (2010–2021) on record at altitudes of above 4,000 m, triggering a decline of the relictual and highly adapted moss Takakia lepidozioides. Its de-novo-sequenced genome with 27,467 protein-coding genes includes distinct adaptations to abiotic stresses and comprises the largest number of fast-evolving genes under positive selection. The uplift of the study site in the last 65 million years has resulted in life-threatening UV-B radiation and drastically reduced temperatures, and we detected several of the molecular adaptations of Takakia to these environmental changes. Surprisingly, specific morphological features likely occurred earlier than 165 mya in much warmer environments. Following nearly 400 million years of evolution and resilience, this species is now facing extinction.

源语言	英语
页（从-至）	3558-3576.e17
期刊	Cell
卷	186
期	17
DOI	https://doi.org/10.1016/j.cell.2023.07.003
出版状态	已出版 - 17 8月 2023

联合国可持续发展目标

此成果有助于实现下列可持续发展目标：

可持续发展目标 13 气候行动

访问文件

10.1016/j.cell.2023.07.003

其它文件与链接

链接到 Scopus 的出版物

引用此

@article{ab2ab0dc4e344e45a1f20f95508759aa,

title = "Adaptive evolution of the enigmatic Takakia now facing climate change in Tibet",

abstract = "The most extreme environments are the most vulnerable to transformation under a rapidly changing climate. These ecosystems harbor some of the most specialized species, which will likely suffer the highest extinction rates. We document the steepest temperature increase (2010–2021) on record at altitudes of above 4,000 m, triggering a decline of the relictual and highly adapted moss Takakia lepidozioides. Its de-novo-sequenced genome with 27,467 protein-coding genes includes distinct adaptations to abiotic stresses and comprises the largest number of fast-evolving genes under positive selection. The uplift of the study site in the last 65 million years has resulted in life-threatening UV-B radiation and drastically reduced temperatures, and we detected several of the molecular adaptations of Takakia to these environmental changes. Surprisingly, specific morphological features likely occurred earlier than 165 mya in much warmer environments. Following nearly 400 million years of evolution and resilience, this species is now facing extinction.",

keywords = "DNA repair, UV radiation, abiotic stress, adaptive evolution, development, fast-evolving genome, gene expansion, global warming, molecular clock, paleontology",

author = "Ruoyang Hu and Xuedong Li and Yong Hu and Runjie Zhang and Qiang Lv and Min Zhang and Xianyong Sheng and Feng Zhao and Zhijia Chen and Yuhan Ding and Huan Yuan and Xiaofeng Wu and Shuang Xing and Xiaoyu Yan and Fang Bao and Ping Wan and Lihong Xiao and Xiaoqin Wang and Wei Xiao and Decker, \{Eva L.\} and \{van Gessel\}, Nico and Hugues Renault and Gertrud Wiedemann and Horst, \{Nelly A.\} and Haas, \{Fabian B.\} and Wilhelmsson, \{Per K.I.\} and Ullrich, \{Kristian K.\} and Eva Neumann and Bin Lv and Chengzhi Liang and Huilong Du and Hongwei Lu and Qiang Gao and Zhukuan Cheng and Hanli You and Peiyong Xin and Jinfang Chu and Huang, \{Chien Hsun\} and Yang Liu and Shanshan Dong and Liangsheng Zhang and Fei Chen and Lei Deng and Fuzhou Duan and Wenji Zhao and Kai Li and Zhongfeng Li and Xingru Li and Hengjian Cui and Zhang, \{Yong E.\} and Chuan Ma and Ruiliang Zhu and Yu Jia and Meizhi Wang and Mitsuyasu Hasebe and Jinzhong Fu and Bernard Goffinet and Hong Ma and Rensing, \{Stefan A.\} and Ralf Reski and Yikun He",

note = "Publisher Copyright: {\textcopyright} 2023 Elsevier Inc.",

year = "2023",

month = aug,

day = "17",

doi = "10.1016/j.cell.2023.07.003",

language = "英语",

volume = "186",

pages = "3558--3576.e17",

journal = "Cell",

issn = "0092-8674",

publisher = "Elsevier B.V.",

number = "17",

}

Hu, R, Li, X, Hu, Y, Zhang, R, Lv, Q, Zhang, M, Sheng, X, Zhao, F, Chen, Z, Ding, Y, Yuan, H, Wu, X, Xing, S, Yan, X, Bao, F, Wan, P, Xiao, L, Wang, X, Xiao, W, Decker, EL, van Gessel, N, Renault, H, Wiedemann, G, Horst, NA, Haas, FB, Wilhelmsson, PKI, Ullrich, KK, Neumann, E, Lv, B, Liang, C, Du, H, Lu, H, Gao, Q, Cheng, Z, You, H, Xin, P, Chu, J, Huang, CH, Liu, Y, Dong, S, Zhang, L, Chen, F, Deng, L, Duan, F, Zhao, W, Li, K, Li, Z, Li, X, Cui, H, Zhang, YE, Ma, C, Zhu, R, Jia, Y, Wang, M, Hasebe, M, Fu, J, Goffinet, B, Ma, H, Rensing, SA, Reski, R & He, Y 2023, 'Adaptive evolution of the enigmatic Takakia now facing climate change in Tibet', Cell, 卷 186, 号码 17, 页码 3558-3576.e17. https://doi.org/10.1016/j.cell.2023.07.003

TY - JOUR

T1 - Adaptive evolution of the enigmatic Takakia now facing climate change in Tibet

AU - Hu, Ruoyang

AU - Li, Xuedong

AU - Hu, Yong

AU - Zhang, Runjie

AU - Lv, Qiang

AU - Zhang, Min

AU - Sheng, Xianyong

AU - Zhao, Feng

AU - Chen, Zhijia

AU - Ding, Yuhan

AU - Yuan, Huan

AU - Wu, Xiaofeng

AU - Xing, Shuang

AU - Yan, Xiaoyu

AU - Bao, Fang

AU - Wan, Ping

AU - Xiao, Lihong

AU - Wang, Xiaoqin

AU - Xiao, Wei

AU - Decker, Eva L.

AU - van Gessel, Nico

AU - Renault, Hugues

AU - Wiedemann, Gertrud

AU - Horst, Nelly A.

AU - Haas, Fabian B.

AU - Wilhelmsson, Per K.I.

AU - Ullrich, Kristian K.

AU - Neumann, Eva

AU - Lv, Bin

AU - Liang, Chengzhi

AU - Du, Huilong

AU - Lu, Hongwei

AU - Gao, Qiang

AU - Cheng, Zhukuan

AU - You, Hanli

AU - Xin, Peiyong

AU - Chu, Jinfang

AU - Huang, Chien Hsun

AU - Liu, Yang

AU - Dong, Shanshan

AU - Zhang, Liangsheng

AU - Chen, Fei

AU - Deng, Lei

AU - Duan, Fuzhou

AU - Zhao, Wenji

AU - Li, Kai

AU - Li, Zhongfeng

AU - Li, Xingru

AU - Cui, Hengjian

AU - Zhang, Yong E.

AU - Ma, Chuan

AU - Zhu, Ruiliang

AU - Jia, Yu

AU - Wang, Meizhi

AU - Hasebe, Mitsuyasu

AU - Fu, Jinzhong

AU - Goffinet, Bernard

AU - Ma, Hong

AU - Rensing, Stefan A.

AU - Reski, Ralf

AU - He, Yikun

PY - 2023/8/17

Y1 - 2023/8/17

N2 - The most extreme environments are the most vulnerable to transformation under a rapidly changing climate. These ecosystems harbor some of the most specialized species, which will likely suffer the highest extinction rates. We document the steepest temperature increase (2010–2021) on record at altitudes of above 4,000 m, triggering a decline of the relictual and highly adapted moss Takakia lepidozioides. Its de-novo-sequenced genome with 27,467 protein-coding genes includes distinct adaptations to abiotic stresses and comprises the largest number of fast-evolving genes under positive selection. The uplift of the study site in the last 65 million years has resulted in life-threatening UV-B radiation and drastically reduced temperatures, and we detected several of the molecular adaptations of Takakia to these environmental changes. Surprisingly, specific morphological features likely occurred earlier than 165 mya in much warmer environments. Following nearly 400 million years of evolution and resilience, this species is now facing extinction.

AB - The most extreme environments are the most vulnerable to transformation under a rapidly changing climate. These ecosystems harbor some of the most specialized species, which will likely suffer the highest extinction rates. We document the steepest temperature increase (2010–2021) on record at altitudes of above 4,000 m, triggering a decline of the relictual and highly adapted moss Takakia lepidozioides. Its de-novo-sequenced genome with 27,467 protein-coding genes includes distinct adaptations to abiotic stresses and comprises the largest number of fast-evolving genes under positive selection. The uplift of the study site in the last 65 million years has resulted in life-threatening UV-B radiation and drastically reduced temperatures, and we detected several of the molecular adaptations of Takakia to these environmental changes. Surprisingly, specific morphological features likely occurred earlier than 165 mya in much warmer environments. Following nearly 400 million years of evolution and resilience, this species is now facing extinction.

KW - DNA repair

KW - UV radiation

KW - abiotic stress

KW - adaptive evolution

KW - development

KW - fast-evolving genome

KW - gene expansion

KW - global warming

KW - molecular clock

KW - paleontology

UR - https://www.scopus.com/pages/publications/85167827135

U2 - 10.1016/j.cell.2023.07.003

DO - 10.1016/j.cell.2023.07.003

M3 - 文章

C2 - 37562403

AN - SCOPUS:85167827135

SN - 0092-8674

VL - 186

SP - 3558-3576.e17

JO - Cell

JF - Cell

IS - 17

ER -

Adaptive evolution of the enigmatic Takakia now facing climate change in Tibet

摘要

联合国可持续发展目标

访问文件

其它文件与链接

指纹

引用此