TY - GEN
T1 - ReactGPT
T2 - 39th Annual AAAI Conference on Artificial Intelligence, AAAI 2025
AU - Chen, Zhe
AU - Fang, Zhe
AU - Tian, Wenhao
AU - Long, Zhaoguang
AU - Sun, Changzhi
AU - Chen, Yuefeng
AU - Yuan, Hao
AU - Li, Honglin
AU - Lan, Man
N1 - Publisher Copyright:
© 2025, Association for the Advancement of Artificial Intelligence (www.aaai.org). All rights reserved.
PY - 2025/4/11
Y1 - 2025/4/11
N2 - The interdisciplinary field of chemistry and artificial intelligence (AI) is an active area of research aimed at accelerating scientific discovery. Large language Models (LLMs) have shown significant promise in biochemical tasks, especially the molecule caption translation, which aims to align between molecules and natural language texts. However, existing works mainly focus on single molecules, while alignment between chemical reactions and natural language text remains largely unexplored. Additionally, the description of reactions is an essential part in biochemical patents and literature, and research on this aspect not only can help better understand chemical reactions but also promote research on automating chemical synthesis and retrosynthesis. In this work, we propose ReactGPT, a framework aiming to bridge the gap between chemical reaction and text. ReactGPT allows a new task: reaction captioning, by adapting LLMs to learn reaction-text alignment from context examples via In-Context Tuning. Specifically, ReactGPT jointly leverages a Fingerprints-based Reaction Retrieval module, a Domain-Specific Prompt Design module, and a two-stage In-Context Tuning module. We evaluate the effectiveness of ReactGPT on reaction captioning and experimental procedure prediction, both of these tasks can reflect the understanding of chemical reactions. Experimental results show that compared to previous models, ReactGPT exhibits competitive capabilities in resolving chemical reactions and generating high-quality text with correct structure.
AB - The interdisciplinary field of chemistry and artificial intelligence (AI) is an active area of research aimed at accelerating scientific discovery. Large language Models (LLMs) have shown significant promise in biochemical tasks, especially the molecule caption translation, which aims to align between molecules and natural language texts. However, existing works mainly focus on single molecules, while alignment between chemical reactions and natural language text remains largely unexplored. Additionally, the description of reactions is an essential part in biochemical patents and literature, and research on this aspect not only can help better understand chemical reactions but also promote research on automating chemical synthesis and retrosynthesis. In this work, we propose ReactGPT, a framework aiming to bridge the gap between chemical reaction and text. ReactGPT allows a new task: reaction captioning, by adapting LLMs to learn reaction-text alignment from context examples via In-Context Tuning. Specifically, ReactGPT jointly leverages a Fingerprints-based Reaction Retrieval module, a Domain-Specific Prompt Design module, and a two-stage In-Context Tuning module. We evaluate the effectiveness of ReactGPT on reaction captioning and experimental procedure prediction, both of these tasks can reflect the understanding of chemical reactions. Experimental results show that compared to previous models, ReactGPT exhibits competitive capabilities in resolving chemical reactions and generating high-quality text with correct structure.
UR - https://www.scopus.com/pages/publications/105003905391
U2 - 10.1609/aaai.v39i1.31983
DO - 10.1609/aaai.v39i1.31983
M3 - 会议稿件
AN - SCOPUS:105003905391
T3 - Proceedings of the AAAI Conference on Artificial Intelligence
SP - 84
EP - 92
BT - Special Track on AI Alignment
A2 - Walsh, Toby
A2 - Shah, Julie
A2 - Kolter, Zico
PB - Association for the Advancement of Artificial Intelligence
Y2 - 25 February 2025 through 4 March 2025
ER -