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Identification of a longevity gene through evolutionary rate covariation of insect mito-nuclear genomes

  • Mei Tao
  • , Jiani Chen
  • , Chunlai Cui
  • , Yandong Xu
  • , Jingxiu Xu
  • , Zheyi Shi
  • , Jiaqi Yun
  • , Junwei Zhang
  • , Guo Zheng Ou
  • , Chao Liu
  • , Yun Chen
  • , Zeng Rong Zhu
  • , Ronghui Pan
  • , Suhong Xu
  • , Xue Xin Chen
  • , Antonis Rokas
  • , Yang Zhao
  • , Sibao Wang*
  • , Jianhua Huang*
  • , Xing Xing Shen*
  • *Corresponding author for this work
  • Zhejiang University
  • CAS - Center for Excellence in Molecular Plant Sciences
  • Zhejiang Provincial Key Lab of Genetic and Developmental Disorder
  • ZJU-Hangzhou Global Scientific and Technological Innovation Center
  • Vanderbilt University

Research output: Contribution to journalLetterpeer-review

Abstract

Oxidative phosphorylation, essential for energy metabolism and linked to the regulation of longevity, involves mitochondrial and nuclear genes. The functions of these genes and their evolutionary rate covariation (ERC) have been extensively studied, but little is known about whether other nuclear genes not targeted to mitochondria evolutionarily and functionally interact with mitochondrial genes. Here we systematically examined the ERC of mitochondrial and nuclear benchmarking universal single-copy ortholog (BUSCO) genes from 472 insects, identifying 75 non-mitochondria-targeted nuclear genes. We found that the uncharacterized gene CG11837—a putative ortholog of human DIMT1—regulates insect lifespan, as its knockdown reduces median lifespan in five diverse insect species and Caenorhabditis elegans, whereas its overexpression extends median lifespans in fruit flies and C. elegans and enhances oxidative phosphorylation gene activity. Additionally, DIMT1 overexpression protects human cells from cellular senescence. Together, these data provide insights into the ERC of mito-nuclear genes and suggest that CG11837 may regulate longevity across animals.

Original languageEnglish
Pages (from-to)1076-1088
Number of pages13
JournalNature Aging
Volume4
Issue number8
DOIs
StatePublished - Aug 2024
Externally publishedYes

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