Development of polymorphic microsatellite markers for Ginkgo biloba L. by database mining

Yuan Yuan Li; Li Ping Zang; Xiao Yong Chen

doi:10.1007/s12686-009-9019-6

Development of polymorphic microsatellite markers for Ginkgo biloba L. by database mining

Yuan Yuan Li
, Li Ping Zang
, Xiao Yong Chen^*

^*Corresponding author for this work

School of Ecology and Environmental Sciences

Research output: Contribution to journal › Article › peer-review

4 Scopus citations

Abstract

Ginkgo biloba L. is a famous living fossil plant endemic to China. We report twelve polymorphic simple sequence repeat (SSRs) markers of G. biloba by mining expressed sequence tags (ESTs). One locus was significantly deviated from Hardy-Weinberg equilibrium. The number of alleles per locus ranged from 2 to 5. The PIC values were from 0.058 to 0.776. Observed and expected heterozygosity ranged from 0.050 to 0.776, and 0.055 to 0.799, respectively. These markers will be available for studies of population genetics, reproductive ecology and conservation genetics for G. biloba.

Original language	English
Pages (from-to)	81-83
Number of pages	3
Journal	Conservation Genetics Resources
Volume	1
Issue number	1
DOIs	https://doi.org/10.1007/s12686-009-9019-6
State	Published - Dec 2009

Keywords

ESTs
Genetic diversity
Ginkgo biloba
Microsatellites

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10.1007/s12686-009-9019-6

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title = "Development of polymorphic microsatellite markers for Ginkgo biloba L. by database mining",

abstract = "Ginkgo biloba L. is a famous living fossil plant endemic to China. We report twelve polymorphic simple sequence repeat (SSRs) markers of G. biloba by mining expressed sequence tags (ESTs). One locus was significantly deviated from Hardy-Weinberg equilibrium. The number of alleles per locus ranged from 2 to 5. The PIC values were from 0.058 to 0.776. Observed and expected heterozygosity ranged from 0.050 to 0.776, and 0.055 to 0.799, respectively. These markers will be available for studies of population genetics, reproductive ecology and conservation genetics for G. biloba.",

keywords = "ESTs, Genetic diversity, Ginkgo biloba, Microsatellites",

author = "Li, \{Yuan Yuan\} and Zang, \{Li Ping\} and Chen, \{Xiao Yong\}",

year = "2009",

month = dec,

doi = "10.1007/s12686-009-9019-6",

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volume = "1",

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T1 - Development of polymorphic microsatellite markers for Ginkgo biloba L. by database mining

AU - Li, Yuan Yuan

AU - Zang, Li Ping

AU - Chen, Xiao Yong

PY - 2009/12

Y1 - 2009/12

N2 - Ginkgo biloba L. is a famous living fossil plant endemic to China. We report twelve polymorphic simple sequence repeat (SSRs) markers of G. biloba by mining expressed sequence tags (ESTs). One locus was significantly deviated from Hardy-Weinberg equilibrium. The number of alleles per locus ranged from 2 to 5. The PIC values were from 0.058 to 0.776. Observed and expected heterozygosity ranged from 0.050 to 0.776, and 0.055 to 0.799, respectively. These markers will be available for studies of population genetics, reproductive ecology and conservation genetics for G. biloba.

AB - Ginkgo biloba L. is a famous living fossil plant endemic to China. We report twelve polymorphic simple sequence repeat (SSRs) markers of G. biloba by mining expressed sequence tags (ESTs). One locus was significantly deviated from Hardy-Weinberg equilibrium. The number of alleles per locus ranged from 2 to 5. The PIC values were from 0.058 to 0.776. Observed and expected heterozygosity ranged from 0.050 to 0.776, and 0.055 to 0.799, respectively. These markers will be available for studies of population genetics, reproductive ecology and conservation genetics for G. biloba.

KW - ESTs

KW - Genetic diversity

KW - Ginkgo biloba

KW - Microsatellites

UR - https://www.scopus.com/pages/publications/84859976439

U2 - 10.1007/s12686-009-9019-6

DO - 10.1007/s12686-009-9019-6

M3 - 文章

AN - SCOPUS:84859976439

SN - 1877-7252

VL - 1

SP - 81

EP - 83

JO - Conservation Genetics Resources

JF - Conservation Genetics Resources

IS - 1

ER -

Development of polymorphic microsatellite markers for Ginkgo biloba L. by database mining

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Keywords

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