Development and characterization of microsatellite markers for Solen grandis using illumina sequencing approach

Y. W. Feng, H. L. Jiang, Y. T. Liu, X. P. Wu, X. Q. Liu, X. M. Wei

Research output: Contribution to journalArticlepeer-review

2 Scopus citations

Abstract

Solen grandis is an important economic and overexploited bivalve species. In order to perform its fine-scale genetic analyses, 105 pairs of microsatellites with polymorphism were identified through Illumina Hiseq platform and bioinformatic assembly technology in this study. The estimated fragment size ranged from 100 to 268 bp and the number of alleles per locus varied between 2 and 23. Observed and expected heterozygosities varied from 0.0667 to 1.0000 and 0.0966 to 0.9492, respectively. Fourteen loci deviated significantly from Hardy-Weinberg equilibrium after Bonferroni correction. These microsatellite markers developed in this study would be helpful for future genetic studies on S. grandis and closely related species.

Original languageEnglish
Article numbergmr16019621
JournalGenetics and Molecular Research
Volume16
Issue number1
DOIs
StatePublished - 8 Feb 2017
Externally publishedYes

Keywords

  • Illumina sequencing
  • Microsatellite
  • Solen grandis

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