Deep Adversarial Network Based Stain Unmixing for Brightfield Multiplex Immunohistochemistry Images

Siyuan Xu, Guannan Li, Mingxue Gu, Qingli Li

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

2 Scopus citations

Abstract

Multiplex immunohistochemistry (IHC) makes it possible to simultaneously label multiple protein biomarkers with different colored stains in a tissue section. Unmixing the multiplex IHC image provides an efficient way to obtain the rich diagnostic information each biomarker contains. However, due to the limitation of three-channel RGB images taken by a CCD color camera, it is challenging to unmix brightfield multiplex IHC images with more than three stains. The main technical challenge is that the unmixing is inherent underdeterminate, leading to the possibility of multiple solutions. In this paper, we propose a novel unmixing method using generative adversarial networks (GANs) for brightfield multiplex IHC images containing more than three stains. Our method takes advantage of slides stained only with individual biomarker to address the intriguing task without any human annotation. We propose to employ adversarial training to automatically learn the optimal unmixing, without relying on any inadequately designed priori. To the best of our knowledge, the method achieves state-of-the-art (SOTA) results in terms of unmixing quality, speed, and practicality, as evidenced by both pathologists' visual comparisons and quantitative experiments.

Original languageEnglish
Title of host publicationProceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023
EditorsXingpeng Jiang, Haiying Wang, Reda Alhajj, Xiaohua Hu, Felix Engel, Mufti Mahmud, Nadia Pisanti, Xuefeng Cui, Hong Song
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages2314-2319
Number of pages6
ISBN (Electronic)9798350337488
DOIs
StatePublished - 2023
Event2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023 - Istanbul, Turkey
Duration: 5 Dec 20238 Dec 2023

Publication series

NameProceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023

Conference

Conference2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023
Country/TerritoryTurkey
CityIstanbul
Period5/12/238/12/23

Keywords

  • generative adversarial networks
  • multiplex immunohistochemistry image
  • stain unmixing

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