TY - GEN
T1 - Deep Adversarial Network Based Stain Unmixing for Brightfield Multiplex Immunohistochemistry Images
AU - Xu, Siyuan
AU - Li, Guannan
AU - Gu, Mingxue
AU - Li, Qingli
N1 - Publisher Copyright:
© 2023 IEEE.
PY - 2023
Y1 - 2023
N2 - Multiplex immunohistochemistry (IHC) makes it possible to simultaneously label multiple protein biomarkers with different colored stains in a tissue section. Unmixing the multiplex IHC image provides an efficient way to obtain the rich diagnostic information each biomarker contains. However, due to the limitation of three-channel RGB images taken by a CCD color camera, it is challenging to unmix brightfield multiplex IHC images with more than three stains. The main technical challenge is that the unmixing is inherent underdeterminate, leading to the possibility of multiple solutions. In this paper, we propose a novel unmixing method using generative adversarial networks (GANs) for brightfield multiplex IHC images containing more than three stains. Our method takes advantage of slides stained only with individual biomarker to address the intriguing task without any human annotation. We propose to employ adversarial training to automatically learn the optimal unmixing, without relying on any inadequately designed priori. To the best of our knowledge, the method achieves state-of-the-art (SOTA) results in terms of unmixing quality, speed, and practicality, as evidenced by both pathologists' visual comparisons and quantitative experiments.
AB - Multiplex immunohistochemistry (IHC) makes it possible to simultaneously label multiple protein biomarkers with different colored stains in a tissue section. Unmixing the multiplex IHC image provides an efficient way to obtain the rich diagnostic information each biomarker contains. However, due to the limitation of three-channel RGB images taken by a CCD color camera, it is challenging to unmix brightfield multiplex IHC images with more than three stains. The main technical challenge is that the unmixing is inherent underdeterminate, leading to the possibility of multiple solutions. In this paper, we propose a novel unmixing method using generative adversarial networks (GANs) for brightfield multiplex IHC images containing more than three stains. Our method takes advantage of slides stained only with individual biomarker to address the intriguing task without any human annotation. We propose to employ adversarial training to automatically learn the optimal unmixing, without relying on any inadequately designed priori. To the best of our knowledge, the method achieves state-of-the-art (SOTA) results in terms of unmixing quality, speed, and practicality, as evidenced by both pathologists' visual comparisons and quantitative experiments.
KW - generative adversarial networks
KW - multiplex immunohistochemistry image
KW - stain unmixing
UR - https://www.scopus.com/pages/publications/85184887719
U2 - 10.1109/BIBM58861.2023.10386010
DO - 10.1109/BIBM58861.2023.10386010
M3 - 会议稿件
AN - SCOPUS:85184887719
T3 - Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023
SP - 2314
EP - 2319
BT - Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023
A2 - Jiang, Xingpeng
A2 - Wang, Haiying
A2 - Alhajj, Reda
A2 - Hu, Xiaohua
A2 - Engel, Felix
A2 - Mahmud, Mufti
A2 - Pisanti, Nadia
A2 - Cui, Xuefeng
A2 - Song, Hong
PB - Institute of Electrical and Electronics Engineers Inc.
T2 - 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023
Y2 - 5 December 2023 through 8 December 2023
ER -