DCFG: Discovering Directional CounterFactual Generation for Chest X-rays

  • Yan Li
  • , Shasha Liu
  • , Chunwei Wu
  • , Xidong Xi
  • , Guitao Cao*
  • , Wenming Cao
  • *Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

3 Scopus citations

Abstract

While Deep Neural Networks (DNNs) are achieving state-of-the-art performance on medical domains across a variety of tasks, the need for explainability of model predictions in these high-stakes tasks is still lacking. Current for the explainability in model predictions potentially relies on the supervised counterfactual generation that is time-consuming and direction uncontrollable. Yet, the counterfactual generation needs to be easy to implement and have a controllable direction. In light of this trend, we propose an approach for the unsupervised latent direction search of black-box models that are steerable to the user by enabling the user to effectively explore counterfactual generation in a directional way, without relying on domain- or data-specific assumptions. To identify these explainable directions, we use Principal Component Analysis (PCA), a general manifold learning framework to extract low-dimensional subspaces based on a local noise injection of the pre-trained generative model, so that a small perturbation in the subspaces would provide enough change in the resulting data. With experiments on three real-world CXR datasets involving 6 tasks, we find that our approach is capable of learning explainable predictions that discard unrelated confounding factors. Moreover, our method enables practitioners to edit directions to better understand which features are used for predictions.

Original languageEnglish
Title of host publicationProceedings - 2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021
EditorsYufei Huang, Lukasz Kurgan, Feng Luo, Xiaohua Tony Hu, Yidong Chen, Edward Dougherty, Andrzej Kloczkowski, Yaohang Li
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages972-979
Number of pages8
ISBN (Electronic)9781665401265
DOIs
StatePublished - 2021
Event2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021 - Virtual, Online, United States
Duration: 9 Dec 202112 Dec 2021

Publication series

NameProceedings - 2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021

Conference

Conference2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021
Country/TerritoryUnited States
CityVirtual, Online
Period9/12/2112/12/21

Keywords

  • Black-box Models
  • Directional CounterFactual Generation
  • Explainability
  • Explainable Artificial Intelligence

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