Data classification and weighted evidence accumulation to detect relevant pathology

Fahimeh Nezhadalinaei, Lei Zhang, Reza Ghaemi, Faezeh Jamshidi

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Cancer is considered as one of the world's most serious illnesses. There are more than 100 types of cancer, which can bring major national burden for countries. MicroRNAs (miRNAs) are a class of small noncoding ribonucleic acids (RNAs) that have a crucial part of cancer tissue formation and some miRNAs are differentially expressed in a normal and cancerous tumor. Therefore, it is possible to diagnose cancer by analysis of individual's miRNAs, which it is not an easy process, because of the huge number of miRNAs. In this regard, informative miRNAs selection can play an important role to diagnose cancer. The interest of this paper is to improve the performance of miRNAs selection by using different classification methods on representative miRNAs of normal and cancer class, which is determined based on FMIMS and combine its results by our proposed approach named Weighted Evidence Accumulation (W-EAC). The performances of this method are evaluated on Gene Expression Omnibus (GEO repository) consisting of the samples from Pancreas Cancer, Nasopharyngeal Cancer, Colorectal Cancer, Lung Cancer and Melanoma Cancer.

Original languageEnglish
Title of host publication2020 5th International Conference on Computer and Communication Systems, ICCCS 2020
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages28-34
Number of pages7
ISBN (Electronic)9781728161365
DOIs
StatePublished - May 2020
Event5th International Conference on Computer and Communication Systems, ICCCS 2020 - Shanghai, China
Duration: 15 May 202018 May 2020

Publication series

Name2020 5th International Conference on Computer and Communication Systems, ICCCS 2020

Conference

Conference5th International Conference on Computer and Communication Systems, ICCCS 2020
Country/TerritoryChina
CityShanghai
Period15/05/2018/05/20

Keywords

  • Cancer
  • Classification
  • Clustering ensemble
  • MiRNA
  • Weighted evidence accumulation

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