TY - JOUR
T1 - Complete chloroplast genome of Vincetoxicum hainanense (Apocynaceae: Asclepiadoideae), an endangered liana endemic to China
AU - Xiong, Wujian
AU - Lee, Shiou Yih
AU - Liu, Panpan
AU - You, Wenhui
AU - Liao, Wenbo
N1 - Publisher Copyright:
© 2019, © 2019 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.
PY - 2019/7/3
Y1 - 2019/7/3
N2 - Vincetoxicum hainanense is an endangered liana species endemic to China. Habitat destruction coupled with difficulties in natural pollination has reduced its population size over time. As present studies have focussed more on breeding programmes instead of molecular aspects, here we reported on the complete chloroplast (cp) genome sequence of V. hainanense. The cp genome is 161,280 bp in size and includes two inverted repeat (IR) regions of 24,884 bp each, which is separated by a large-single copy (LSC) region of 92,084 bp and a small-single copy (SSC) region of 19,428 bp. A total of 131 genes were predicted, including 37 tRNA, 8 rRNA, and 86 protein-coding genes. Phylogenetic analysis showed that V. hainanense is clustered with other Apocynaceae species and sister to Biondia chinensis.
AB - Vincetoxicum hainanense is an endangered liana species endemic to China. Habitat destruction coupled with difficulties in natural pollination has reduced its population size over time. As present studies have focussed more on breeding programmes instead of molecular aspects, here we reported on the complete chloroplast (cp) genome sequence of V. hainanense. The cp genome is 161,280 bp in size and includes two inverted repeat (IR) regions of 24,884 bp each, which is separated by a large-single copy (LSC) region of 92,084 bp and a small-single copy (SSC) region of 19,428 bp. A total of 131 genes were predicted, including 37 tRNA, 8 rRNA, and 86 protein-coding genes. Phylogenetic analysis showed that V. hainanense is clustered with other Apocynaceae species and sister to Biondia chinensis.
KW - Apocynaceae
KW - Illumina sequencing
KW - Vincetoxicum hainanense
KW - genomic resources
KW - phylogenetic analysis
UR - https://www.scopus.com/pages/publications/85073593100
U2 - 10.1080/23802359.2019.1674714
DO - 10.1080/23802359.2019.1674714
M3 - 文章
AN - SCOPUS:85073593100
SN - 2380-2359
VL - 4
SP - 3608
EP - 3609
JO - Mitochondrial DNA Part B: Resources
JF - Mitochondrial DNA Part B: Resources
IS - 2
ER -